| Name | Version | Summary | date |
| bioacoustics-model-zoo |
0.12.0 |
Public repository of machine learning models for bioacoustics, with OpenSoundscape integration |
2025-07-29 22:18:44 |
| pingseg |
0.0.1a0 |
Utility to perform semantic segmentation on sonar imagery. |
2025-07-21 18:47:26 |
| pingtile |
0.0.1a2 |
Interface to tile sonar mosaics and maps. |
2025-07-21 18:39:15 |
| biolith |
0.0.9 |
Bayesian Ecological Modeling in Python |
2025-07-21 05:10:18 |
| habimapper |
0.0.1a0 |
Interface for predicting and mapping benthic habitat (substrates) from any side-scan sonar mosaic. |
2025-07-20 12:51:49 |
| pingmapper |
5.0.4 |
Open-source interface for processing recreation-grade side scan sonar datasets and reproducibly mapping benthic habitat |
2025-07-20 12:43:34 |
| pinginstaller |
1.0.19 |
Light-weight interface for running PING ecosystem (PINGMapper, etc.) |
2025-07-19 14:13:46 |
| mget3 |
3.4.0 |
Marine Geospatial Ecology Tools: access and manipulate marine ecological and oceanographic data |
2025-07-14 14:58:46 |
| animl |
1.4.6 |
Tools for classifying camera trap images |
2025-02-13 01:16:31 |
| phenopype |
6.1.0 |
A phenotyping pipeline for python |
2025-02-03 23:13:53 |
| phenopype-plugins |
0.2.0 |
AI and other plugins for phenopype |
2025-02-03 03:17:34 |
| pingwizard |
1.0.4 |
Light-weight interface for running PING ecosystem (PINGMapper, etc.) |
2025-01-08 06:29:02 |
| pingverter |
1.0.2 |
A Python-based converter for sonar logs used by PINGMapper |
2025-01-05 19:22:29 |
| COMSTABPY |
0.1.2 |
COMSTABPY is an python package that contains basic functions to apply the unified framework for partitioning the drivers of stability of ecological communities |
2024-11-26 13:37:42 |
| biodumpy |
0.1.3 |
A Comprehensive Biological Data Downloader from authoritative public databases like NCBI, Catalogue Of Life (COL), GBIF, BOLD, and more for any taxa. |
2024-09-20 15:10:00 |
| scikit-maad |
1.4.3 |
Open-source and modular toolbox for quantitative soundscape analysis in Python |
2024-08-09 01:59:08 |
| metacast |
0.2.0 |
A package for broadcasting epidemiological and ecological models over meta-populations. |
2024-07-22 17:11:15 |
| rsdb-utils |
0.5 |
Utils to process the Regime Shifts DataBase CSV and parquet files |
2024-07-02 15:44:07 |
| taxonerd |
1.5.4 |
A Python package and CLI tool based on spaCy for detecting mentions of taxonomic entities in text |
2024-06-12 08:11:47 |
| LANDMarkClassifier |
2.1.1 |
LANDMark: An ensemble approach to the supervised selection of biomarkers in high-throughput sequencing data |
2024-04-27 05:00:27 |